BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB030A10SP1|AL429155
(891 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1805 1720 0.0
3x_Contig180 102 2e-21
>3x_Contig1805
Length = 19369
Score = 1720 bits (864), Expect = 0.0
Identities = 873/880 (99%)
Strand = Plus / Minus
Query: 12 tggacatgcaatttttttctatgcacgacgcacaaagaatgaagattggaaagaaaaaca 71
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4222 tggacatgcaatttttttctatgcacgacgcacaaagaatgaagattggaaagaaaaaca 4163
Query: 72 ggaaacgaaaaaccaaaaaaaaaaaaagcaaagcacgtttgawattgcaataacacaagc 131
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 4162 ggaaacgaaaaaccaaaaaaaaaaaaagcaaagcacgtttgatattgcaataacacaagc 4103
Query: 132 gcaagaataactccagcagcaatgaaaaacgtttgtagatctttcgaggaatgtttcttg 191
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4102 gcaagaataactccagcagcaatgaaaaacgtttgtagatctttcgaggaatgtttcttg 4043
Query: 192 tttctatttttgttccgagaaatctttacttccgtttttttttgtgggcgaccgtacaac 251
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 4042 tttctatttttgttccgagaaatctttacttccgtttttttttgtgggcgaccgtacaac 3983
Query: 252 ctcagttgccacggttggctgaaagtgcgttttgccaggttgaaaggtttgactgagcat 311
|||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3982 ctcagttgccacggttggctgaaagtgcgtcttgccaggttgaaaggtttgactgagcat 3923
Query: 312 tcaaagttgcagacagtwacacagcaggtgtcttcacgattctgtgacatggttatttgc 371
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3922 tcaaagttgcagacagttacacagcaggtgtcttcacgattctgtgacatggttatttgc 3863
Query: 372 ctcataataaragaaattgtcctgctctatccatcactgcagcggaaagtacgtycgttt 431
|||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 3862 ctcataataagagaaattgtcctgctctatccatcactgcagcggaaagtacgttcgttt 3803
Query: 432 tgagaaacgcaattagaaaaaatgaaaatcctaaaarttgtacgaagtgttctaagatca 491
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 3802 tgagaaacgcaattagaaaaaatgaaaatcctaaaagttgtacgaagtgttctaagatca 3743
Query: 492 aactgatgtcatttttttcatactgcaaactttcctctgctgcaaccccactactaggtg 551
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3742 aactgatgtcatttttttcatactgcaaactttcctctgctgcaaccccactactaggtg 3683
Query: 552 taaaatgtgcatacgtggggctgccccaccactaaaaggatcaaaagaattttcgtttgg 611
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3682 taaaatgtgcatacgtggggctgccccaccactaaaaggatcaaaagaattttcgtttgg 3623
Query: 612 taatcgacaattttaacgagttacttcattgcagtggaagctcgaagtaaatctgaaacc 671
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3622 taatcgacaattttaacgagttacttcattgcagtggaagctcgaagtaaatctgaaacc 3563
Query: 672 gagccggatgaaggaaaaggcatgatgtaactccttatttattacctgttttgttttgtt 731
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3562 gagccggatgaaggaaaaggcatgatgtaactccttatttattacctgttttgttttgtt 3503
Query: 732 tctcagtatatcagcttatgcagaacttcgacacggtgttttgcgaagaaattgacaaag 791
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3502 tctcagtatatcagcttatgcagaacttcgacacggtgttttgcgaagaaattgacaaag 3443
Query: 792 gattttctcttaaagttaaccagatcacaataagatcgaccctactgcgcaatcaaaatc 851
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3442 gattttctcttaaagttaaccagatcacaataagatcgaccctactgcgcaatcaaaatc 3383
Query: 852 agagawtctttgtgtacgcactggtctattggttaccaga 891
||||| ||||||||||||||||||||||||||||||||||
Sbjct: 3382 agagattctttgtgtacgcactggtctattggttaccaga 3343
>3x_Contig180
Length = 1260
Score = 102 bits (51), Expect = 2e-21
Identities = 175/217 (80%)
Strand = Plus / Plus
Query: 15 acatgcaatttttttctatgcacgacgcacaaagaatgaagattggaaagaaaaacagga 74
|||| |||||||||||||| ||| || |||||| ||| || ||| ||| ||||||| |
Sbjct: 968 acattcaatttttttctattcactactcacaaataattaatattttaaataaaaacatta 1027
Query: 75 aacgaaaaaccaaaaaaaaaaaaagcaaagcacgtttgawattgcaataacacaagcgca 134
||| |||||||||||||||||||| |||| ||| ||| | ||| | ||||||||| | ||
Sbjct: 1028 aactaaaaaccaaaaaaaaaaaaatcaaatcactttttatatttctataacacaatctca 1087
Query: 135 agaataactccagcagcaatgaaaaacgtttgtagatctttcgaggaatgtttcttgttt 194
| | | |||||| | | || |||||| ||| || ||||||| | ||| |||||| |||
Sbjct: 1088 atatttactccatcttctattaaaaacttttttatatctttctattaatttttctttttt 1147
Query: 195 ctatttttgttccgagaaatctttacttccgtttttt 231
|||||||| |||| | |||||||||||||| ||||||
Sbjct: 1148 ctattttttttcctataaatctttacttccttttttt 1184
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 14,685
Number of Sequences: 1807
Number of extensions: 14685
Number of successful extensions: 211
Number of sequences better than 1.0e-20: 2
length of query: 891
length of database: 10,358,551
effective HSP length: 16
effective length of query: 875
effective length of database: 10,329,639
effective search space: 9038434125
effective search space used: 9038434125
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)